Processes

RogueKillerCMD.exe -list PROC
RogueKillerCMD.exe -kill PROC 1234
RogueKillerCMD.exe -kill PROC explorer.exe
RogueKillerCMD.exe -kill WIN "My Nasty Virus"

Services

RogueKillerCMD.exe -list SVC
RogueKillerCMD.exe -kill SVC "My Service"

Registry

RogueKillerCMD.exe -list REG "HKEY_LOCAL_MACHINE\Software\Microsoft\Windows\CurrentVersion\Run"
RogueKillerCMD.exe -kill REG "HKEY_LOCAL_MACHINE\Software\Microsoft\Windows\CurrentVersion\Run\malware"
RogueKillerCMD.exe -kill REG "HKEY_LOCAL_MACHINE\Software\Microsoft\Windows\CurrentVersion\Run:subkey:1"
RogueKillerCMD.exe -kill REG "HKEY_LOCAL_MACHINE\Software\Microsoft\Windows\CurrentVersion\Run:malware"
RogueKillerCMD.exe -kill REG "HKEY_LOCAL_MACHINE\Software\Microsoft\Windows\CurrentVersion\Run:value:1"
RogueKillerCMD.exe -kill REG "HKEY_LOCAL_MACHINE\Software\Microsoft\Windows\CurrentVersion\Run:(default)"

Ads

RogueKillerCMD.exe -list ADS C:/folder
RogueKillerCMD.exe -kill ADS C:/folder:the_ads
RogueKillerCMD.exe -dump ADS C:/folder:the_ads C:/folder/dumped_ads.bin

Scan

Be careful with quotes, some parameters are scan options, while some others are standalone arguments

RogueKillerCMD.exe -scan
RogueKillerCMD.exe -quickscan
RogueKillerCMD.exe -custom_scan -scanoptions processes filesystem task web -scanpaths "C:/my_folder_to_scan" "C:/folder/my_other_folder_to_scan"
RogueKillerCMD.exe -scan -no_interact -deleteall
RogueKillerCMD.exe -scan -no_interact -ignoreall
RogueKillerCMD.exe -scan "-reportpath C:\report.txt -reportformat txt"
RogueKillerCMD.exe -scan "-portable-license C:\my_config.ini" 
RogueKillerCMD.exe -scan -debuglog C:\debug.log
RogueKillerCMD.exe -scan -force_portable_license licenseid@email.com AAAAAAAA-AAAA-AAAA-AAAA-AAAAAAAAAAAA
RogueKillerCMD.exe -scan -portable_signatures "Z:\roguekiller_signatures.zip"

Quarantine

RogueKillerCMD.exe -listquarantine

Misc

RogueKillerCMD.exe -activate licenseid@email.com AAAAAAAA-AAAA-AAAA-AAAA-AAAAAAAAAAAA
RogueKillerCMD.exe -updatesigs